74 void preCheck(
Param& )
const override;
91 void addModificationToPeptideHit_(
Feature& feature,
const String& modification)
const;
103 bool canModificationBeApplied_(
const String& modification_id,
const String& aa)
const;
107 void updateMembers_()
override;
String medium_channel_arginine_label_
Definition: SILACLabeler.h:98
std::vector< FeatureMapSim > FeatureMapSimVector
Sim FeatureMap Vector.
Definition: SimTypes.h:99
Simulate SILAC experiments.
Definition: SILACLabeler.h:50
An LC-MS feature.
Definition: Feature.h:70
In-Memory representation of a mass spectrometry experiment.
Definition: MSExperiment.h:77
Management and storage of parameters / INI files.
Definition: Param.h:73
String heavy_channel_arginine_label_
Definition: SILACLabeler.h:101
static const int LIGHT_FEATURE_MAPID_
Map ID for the light/unlabeled channel.
Definition: SILACLabeler.h:113
static const int HEAVY_FEATURE_MAPID_
Map ID for the heavy labeled channel.
Definition: SILACLabeler.h:117
static const int MEDIUM_FEATURE_MAPID_
Map ID for the medium labeled channel.
Definition: SILACLabeler.h:115
A container for features.
Definition: FeatureMap.h:95
Abstract base class for all kinds of labeling techniques.
Definition: BaseLabeler.h:49
Map class based on the STL map (containing several convenience functions)
Definition: Map.h:50
String medium_channel_lysine_label_
Definition: SILACLabeler.h:97
static BaseLabeler * create()
create new object (needed by Factory)
Definition: SILACLabeler.h:62
String heavy_channel_lysine_label_
Definition: SILACLabeler.h:100
A more convenient string class.
Definition: String.h:58
static const String getProductName()
name of the model (needed by Factory)
Definition: SILACLabeler.h:68
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:46