40 #include <OpenMS/OpenMSConfig.h> Definition: ToolDescription.h:106
MappingParam tr_table
Definition: ToolDescription.h:115
A more convenient string class.
Definition: String.h:58
bool operator<(const MultiplexDeltaMasses &dm1, const MultiplexDeltaMasses &dm2)
String text_finish
Definition: ToolDescription.h:110
String name
Definition: ToolDescription.h:86
String text_startup
Definition: ToolDescription.h:108
String commandline
Definition: ToolDescription.h:112
Maps input/output files to filenames for the external program.
Definition: ToolDescription.h:53
StringList types
-types of the tool (if any, e.g. ['centroided','wavelet'])
Definition: ToolDescription.h:88
FileMapping & operator=(const FileMapping &rhs)
bool is_internal
Definition: ToolDescription.h:85
MappingParam & operator=(const MappingParam &rhs)
void append(const T &i, String &target)
Definition: StringUtils.h:77
String text_fail
Definition: ToolDescription.h:109
ToolDescription Class.
Definition: ToolDescription.h:83
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:46
String category
Definition: ToolDescription.h:87
String target
TOPP parameter that determines the desired name.
Definition: ToolDescription.h:56
std::vector< FileMapping > post_moves
Definition: ToolDescription.h:70
Definition: ToolDescription.h:122
Filename mappings for all input/output files.
Definition: ToolDescription.h:66
Management and storage of parameters / INI files.
Definition: Param.h:73
std::vector< String > StringList
Vector of String.
Definition: ListUtils.h:70
String location
a regex/macro mix; to be expanded by tool;
Definition: ToolDescription.h:55
std::vector< ToolExternalDetails > external_details
additional details for external tools (one entry for each 'type')
Definition: ToolDescription.h:126
String working_directory
folder where the command will be executed from
Definition: ToolDescription.h:114
std::map< Int, String > mapping
Definition: ToolDescription.h:68
std::vector< FileMapping > pre_moves
Definition: ToolDescription.h:69
Param param
Definition: ToolDescription.h:116
String path
filename to external tool
Definition: ToolDescription.h:113
bool operator==(_Iterator< _Val, _Ref, _Ptr > const &, _Iterator< _Val, _Ref, _Ptr > const &)
Definition: KDTree.h:806
String category
Definition: ToolDescription.h:111